Recep Tayyip Erdoğan Üniversitesi Kurumsal Akademik Arşivi
DSpace@RTEÜ, Recep Tayyip Erdoğan Üniversitesi tarafından doğrudan ve dolaylı olarak yayınlanan; kitap, makale, tez, bildiri, rapor, araştırma verisi gibi tüm akademik kaynakları uluslararası standartlarda dijital ortamda depolar, Üniversitenin akademik performansını izlemeye aracılık eder, kaynakları uzun süreli saklar ve yayınların etkisini artırmak için telif haklarına uygun olarak Açık Erişime sunar.
Güncel Gönderiler
Interactive effects of culture system and carbon source on mineral nutrition, growth, and shoot proliferation in chestnut micropropagation
(Multidisciplinary Digital Publishing Institute (MDPI), 2026) Akyüz, Burak; Hatipoğlu, İbrahim Halil; Demirkaya, Salih; Ay, Abdurrahman; Akyüz, Ayşe
This study investigated the interactive effects of the culture system and carbon source on growth, shoot proliferation, and mineral nutrition dynamics in the in vitro propagation of chestnut. Explants of the ‘Akyüz’ cultivar were used in the Woody Plant Medium. Both plant tissues and culture media were analyzed for Fe, Cu, Mn, Zn, and Mg concentrations. Morphological parameters, nutrient accumulation, and depletion patterns were evaluated. The results demonstrated that the liquid culture system supplemented with sucrose significantly enhanced plant growth, chlorophyll content, callus development, and shoot multiplication. Sucrose treatments promoted higher accumulation of Fe, Cu, Zn, and Mg in plant tissues, whereas glucose treatments resulted in significantly higher Mn accumulation. Correlation and principal component analysis revealed strong positive relationships between growth parameters and Fe, Mg, Cu, and Zn, whereas Mn exhibited significant negative correlations. Among the machine learning models, Support Vector Regression showed the highest predictive performance for plant length (R2 = 0.74) and SPAD (R2 = 0.87). Nutrient depletion analysis showed substantial reductions in mineral concentrations in all treatments after four weeks. Overall, the combination of liquid culture systems with sucrose provides optimal conditions for chestnut micropropagation by promoting favorable nutrient interactions and minimizing antagonistic effects.
Engineering applications of biomechanics in medical sciences: insights from musculoskeletal and cardiovascular systems—a narrative review of the 2020–2026 literature
(Multidisciplinary Digital Publishing Institute (MDPI), 2026) Demiral, Murat; Mamedov, Ali; Köklü, Uğur
Biomechanics sits at the interface of engineering and medical sciences, offering essential insight into how tissues, organs, and biological systems respond to mechanical loading. This review brings together recent advances in musculoskeletal and cardiovascular biomechanics, illustrating how experimental techniques, computational modeling, and multiscale analysis are used to characterize load transfer, tissue deformation, fatigue, and injury mechanisms. In musculoskeletal applications, predictive simulations, wearable sensing technologies, and neuromechanical assessment tools support improved injury prevention, rehabilitation planning, and assistive device development. In the cardiovascular domain, patient-specific modeling, fluid–structure interaction analyses, and advanced imaging approaches clarify how hemodynamics, vessel wall mechanics, and device–tissue interactions influence disease progression, implant performance, and therapeutic outcomes. Emerging technologies including artificial intelligence, machine learning, digital twin frameworks, biofabrication, soft robotics, and self-powered sensing are enabling data-driven, real-time, and personalized interventions that connect mechanistic understanding with clinical practice. Despite these advances, challenges remain in accounting for individual variability, integrating multiscale data, and translating computational predictions into clinically validated solutions. By emphasizing interdisciplinary strategies that unite biomechanics, computational analytics, and innovative device engineering, this review outlines a pathway toward predictive, patient-centered healthcare and next-generation therapeutic and rehabilitation solutions.
Cryotherapy-driven modulation of postoperative pain in single-visit endodontic treatment across different obturation materials: a retrospective study
(Multidisciplinary Digital Publishing Institute (MDPI), 2026) Ilıcalı, Kaan; Şanal Çıkman, Ahter; Başar, Özge
Background/Objectives: This study aimed to evaluate the effect of intracanal cryotherapy on postoperative pain across obturation materials with different chemical compositions and physical properties in single-visit root canal treatment. Methods: Patients diagnosed with irreversible pulpitis (n = 73), treated in a single visit by the same operator, were categorized based on the obturation material used (AH Plus, TotalFill BC Sealer, and TotalFill BC RRM) and whether intracanal cryotherapy (20 mL of sterile saline at 4 °C for 5 min) was applied. Visual Analog Scale (VAS) scores obtained from patient follow-up forms at 24, 48, and 72 h were evaluated. Results: Cryotherapy (+) groups showed consistently lower pain scores at all time points compared with cryotherapy (−) groups (p < 0.001). Within the cryotherapy (+) groups, both TotalFill BC Sealer and TotalFill BC RRM exhibited significantly lower pain scores than AH Plus at 48 h (p < 0.05). In the cryotherapy (−) groups, TotalFill BC Sealer showed significantly lower pain scores on the third postoperative day (p < 0.05). Conclusions: Intracanal cryotherapy may serve as an effective adjunctive technique associated with lower early postoperative pain scores. Material-related differences became evident at 48 and 72 h, suggesting that obturation material selection may influence postoperative pain patterns and patient comfort during the later postoperative period.
Indirect estimation of 25-hydroxyvitamin D reference intervals using data mining
(Multidisciplinary Digital Publishing Institute (MDPI), 2026) Yılmaz, Esra; Kılıç, Hülya
Background: Reference intervals for 25-hydroxyvitamin D are significantly influenced by seasonal variations and population-specific factors. This study aimed to establish local, population-specific Vitamin D reference intervals using the refineR algorithm and to compare these results with the conventional non-parametric method using a hospital database. Methods: A total of 127,220 laboratory results from 2022 to 2025 were retrospectively analyzed. Data were filtered based on adult age, morning fasting specimens, outpatient status, and normal parathyroid hormone levels (14–72 ng/L). Following filtration, Wilcoxon and Kruskal–Wallis tests were employed to evaluate differences between potential subgroups. Consequently, 24,036 eligible results were stratified by age (18–40, 41–65, and >65 years) and sex (female and male). Reference intervals were calculated using the refineR algorithm and the non-parametric percentile method. Results: The distribution of vitamin D levels was found to be right-skewed [Median: 12.92 ng/mL (4.21–149)]. The upper reference limits obtained via refineR were consistently lower than those derived from the non-parametric method. Both methods showed a linear increase in median values and upper reference limits with advancing age. Females in the 18–40 age group exhibited the lowest vitamin D profile. The summer concentrations were significantly higher than those of other seasons (p <0.05). Conclusions: The refineR algorithm managed outliers and pathological results more effectively than the non-parametric method. Our findings highlight the clinical necessity for age- and sex-specific subgroups, rather than relying on the manufacturer’s single reference range. Implementing these population-specific intervals can enhance diagnostic accuracy and prevent misclassification, facilitating earlier identification of vitamin D-related metabolic and skeletal disorders.
Fabrication of hybrid alginate hydrogel beads reinforced with activated carbon and evaluation of their potential for controlled eugenol release
(Multidisciplinary Digital Publishing Institute (MDPI), 2026) Karaoğlu, Kaan; Atak, Mehtap; Yılmaz Baran, Nuray; Baran, Talat
Background/Objectives: This study presents the development of an activated carbon/sodium alginate-based gastric-retentive delivery system aimed at enhancing the gastroprotective efficacy of eugenol (Eug) in simulated body fluids. Methods: Hybrid hydrogel beads were fabricated using tea waste-derived activated carbon (AC) as a core material and sodium alginate as a wall material. Results: The system achieved a loading capacity of 3.37 ± 0.11 mg Eug/g hydrogel beads, and in vitro assays revealed a controlled release profile, with cumulative release reaching 0.694 ± 0.006 mg/g hydrogel beads in simulated gastric fluid (SGF) and 0.198 ± 0.002 mg Eug/g hydrogel beads in simulated intestinal fluid (SIF). Conclusions: Kinetic modeling confirmed a predominantly diffusion-controlled process with non-Fickian transport mechanism, indicating combined diffusion and matrix relaxation. By maintaining local therapeutic concentrations in the gastric mucosa, this pH-responsive Alg/Eug@AC system offers a sustainable strategy to overcome Eug’s low bioavailability and provide effective gastroprotection against oxidative damage.
