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Codon usage bias analysis of the gene encoding NAD+-dependent DNA ligase protein of Invertebrate iridescent virus 6
Aktürk Dizman, Yeşim (Springer, 2023)The genome of Invertebrate iridescent virus 6 (IIV6) contains a sequence that shows similarity to eubacterial NAD+-dependent DNA ligases. The 615-amino acid open reading frame (ORF 205R) consists of several domains, ... -
Codon usage bias in the photolyase gene of amsacta moorei entomopoxvirus
Aktürk Dizman, Yeşim (Pleiades Publishing, 2024)Abstract: Amsacta moorei entomopoxvirus (AMEV) is a poxvirus exclusively infecting insects and has been considered as a potential biological control agent. AMEV includes a CPD photolyase (AMV025, AMEV photolyase gene) ... -
Comprehensive analysis of the codon usage patterns in the polyprotein coding sequences of the honeybee viruses
Aktürk Dizman, Yeşim (Frontiers Media SA, 2025)Honeybee viruses (HVs) are some of the most significant pathogens affecting these insects and are commonly found in beehives across the globe. This viral infection leads to substantial economic losses in the beekeeping ... -
A comprehensive comparative analysis on the codon usage bias of DNA polymerase genes in invertebrate iridescent viruses
Aktürk Dizman, Yeşim (2024)Invertebrate iridescent viruses (IIVs) are classified as double-stranded DNA viruses within the Iridoviridae family. IIVs are viruses that infect invertebrate hosts, causing symptoms that vary in intensity from slight ... -
A detailed analysis of codon usages bias and affecting factors in the topoisomerase ii gene of invertebrate iridescent virus 6
Aktürk Dizman, Yeşim (Afyon Kocatepe Üniversitesi, 2024)The topoisomerase II protein (ORF 045L) of invertebrate iridescent virus 6 (IIV6) plays essential roles in managing DNA topology during viral replication and transcription. Considering the importance of the topoisomerase ... -
Exploring codon usage patterns and influencing factors in ranavirus DNA polymerase genes
Aktürk Dizman, Yeşim (Wiley, 2024)Ranaviruses, members of the genus Ranavirus within the family Iridoviridae, have become a significant concern for amphibian populations globally, along with other cold-blooded vertebrates, due to their emergence as a ... -
Genome-wide analysis of codon usage bias in Ascovirus: Insights into viral evolution and host adaptation
Aktürk Dizman, Yeşim (Academic Press, 2025)Ascoviruses are circular double-stranded DNA viruses that infect lepidopterans, producing large enveloped virions and causing a chronic, deadly disease with apoptosis-like cytopathology. Understanding the codon usage ...