Yazar "Özgümüş, Osman Birol" için Scopus İndeksli Yayınlar Koleksiyonu listeleme
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Antibiotic resistance profiles of enteric cacteria isolated from Kucukcekmece Lagoon (Istanbul-Turkey)
Sivri, Nuket; Sandallı, Cemal; Özgümüş, Osman Birol; Çolakoğlu, Feyza; Doğan, Dilek (Central Fisheries Research Inst, 2012)The aim of this study is to find out the density of the fecal bacteria and to analyze resistance to antimicrobials of Gram negative bacilli isolated from the Kucukcekmece Lagoon, Istanbul. Samples were taken monthly from ... -
Antimicrobial resistance patterns and integron carriage of escherichia coli isolates causing community-acquired infections in Turkey
Çiçek, Ayşegül Çopur; Özgümüş, Osman Birol; Saral, Ayşegül; Sandallı, Cemal (Korean Soc Laboratory Medicine, 2014)We aimed to observe antimiCrobial resistance patterns and integron carriage of Escherichia coli isolates causing community-acquired infections. Two hundred sixty-eight E. coli strains were obtained from outpatients with ... -
Carriage of class 1 and 2 integrons in acinetobacter baumannii and pseudomonas aeruginosa isolated from clinical specimens and a novel gene cassette array: bla(OXA-11)-cmlA7
Mengeloğlu, Fırat Zafer; Çiçek, Ayşegül Çopur; Koçoğlu, Esra; Sandallı, Cemal; Budak, Emine Esra; Özgümüş, Osman Birol (Ankara Microbiology Soc, 2014)The dissemination of antibiotic resistance genes between bacteria leads to serious problems in the treatment of infectious diseases. It has been shown that resistance genes can also be carried by the integrons. There are ... -
Characterization of class 1 and class 2 integron gene cassettes in escherichia coil strains isolated from urine cultures: A multicenter study
Çopur Çiçek, Ayşegül; Sandallı, Cemal; Budak, Emine Esra; Yağmur, Gülhan; Çizmeci, Zeynep; Ak, Sibel; Balcı, Pervin Özlem; Say Coşkun, Safiye Umut; Ay Altıntop, Yasemin; Fırat, Mehmet; Sarı, Fatma; Çalışkan, Ahmet; Yıldız, Nazan; Sancaktar, Metin; Özgümüş, Osman Birol (Ankara Microbiology Soc, 2016)Escherichia coli is the most common pathogen isolated from both nosocomial and community acquired urinary tract infections. Although there are many studies from different centers concerning the antibiotic susceptibility ... -
Characterization of tetracycline resistance genes in tetracycline-resistant Enterobacteriaceae obtained from a coliform collection
Sandallı, Cemal; Özgümüş, Osman Birol; Sevim, Ali (Springer, 2010)Tetracycline resistance has been used as the key determinant to monitor resistance genes in natural environments such as rivers, lakes or seawater. The aim of this study was evaluate the frequency of tetA, tetB, tetC, tetD ... -
Class 1 and class 2 integrons and plasmid-mediated antibiotic resistance in coliforms isolated from ten rivers in northern Turkey
We aimed to determine the molecular mechanisms of antibiotic resistance in coliforms isolated from ten rivers in northern region of Turkey. A total of 183 isolates were tested for antimicrobial susceptibility by disk ... -
Comparison of a novel antigen detection test with reverse transcription polymerase chain reaction assay for laboratory diagnosis of SARS-CoV-2 infection
Cirit, Osman Sezen; Mutlu, Esvet; Sancak, Banu; Kocagöz, Tanıl; Can, Özge; Çiçek, Candan; Sayıner, Ayça Arzu; Appak, Özgür; Uyar, Neval Yurttutan; Külah, Canan; Çiçek, Ayşegül Çopur; Özgümüş, Osman Birol; Altıntop, Yasemin Ay; Saatçi, Esma; Karslıgil, Tekin; Zer, Yasemin; Özen, Nevgün Sepin; Çekin, Yeşim; Karahan, Zeynep Ceren; Evren, Ebru; Karakoç, Ayşe Esra; Orhan, Sultan Gülbahçe; Mutlu, Derya; Bozdemir, Tuğba; Çaycı, Yeliz Tanrıverdi; Çınar, Canberk; Taşbakan, Meltem; Mert, Merve; Çınar, Ece; Kutlusoy, Oya Özlem Eren; Kocagöz, Sesin; Ertürk, Ayşe; Çelik, İlhami; Mete, Ayşe Özlem; Eneyli, Müge Günalp; Akdemir, İrem; Karakök, Taliha; İnan, Dilara; Atilla, Aynur; Taflan, Şevket Onur; Yörük, Kağan Etka (Springer, 2022)Molecular diagnosis of severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) by real-time reverse transcription polymerase chain reaction (RT-PCR) in respiratory specimens is considered the gold standard method. ... -
Determination and molecular analysis of antibiotic resistance in Gram-negative enteric bacteria isolated from Pelophylax sp. in the Eastern Black Sea Region (vol 69, pg 223, 2021)
Rakıcı, Erva; Altunışık, Abdullah; Şahin, Kazım; Özgümüş, Osman Birol (Akademia Kiado Zrt., 2021)The sentence 'However, two of three quinolone-resistant Klebsiella strains showed the novel amino acid substitution in the gyrA gene resulting in Ser83Asp and Asp87Glu.' should be corrected to 'However, one of three ... -
Distribution of beta-lactamase genes among carbapenem-resistant klebsiella pneumoniae strains isolated from patients in Turkey
Iraz, Meryem; Düzgün, Azer Özad; Sandallı, Cemal; Doymaz, Mehmet Ziya; Akkoyunlu, Yasemin; Saral, Ayşegül; Peleg, Anton Y.; Özgümüş, Osman Birol; Beriş, Fatih Şaban; Karaoğlu, Hakan; Çiçek, Ayşegül Çopur (Korean Soc Laboratory Medicine, 2015)Background: the emergence of carbapenem-resistant Klebsiella pneumoniae poses a serious problem to antibiotic management. We investigated the beta-lactamases in a group of carbapenem-resistant K. pneumoniae clinical isolates ... -
Horizontol dissemination of TEM- and SHV-type beta-lactamase genes-carrying resistance plasmids amongst clinical isolates of Enterobacteriaceae
Özgümüş, Osman Birol; Tosun, İlknur; Aydın, Faruk; Kılıç, Ali Osman (SOC BRASILEIRA MICROBIOLOGIA, AV PROF LINEU PRESTES, 1374, 05508 SAO PAULO, BREZİLYA, 2008)The extended-spectrum ?-lactamase (ESBL)-producing bacteria have been isolated at increasing frequency worldwide. Expression of ESBL is often associated with multidrug resistance and dissemination by resistance plasmids. ... -
Investigation of antibiotic resistance profile and TEM-type β-lactamase gene carriage of ampicillin-resistant Escherichia coli strains isolated from drinking water
Karaoğlu, Şengül Alpay; Özgümüş, Osman Birol; Sevim, Elif; Kolaylı, Fetiye; Sevim, Ali; Yeşilgil, Pınar (Springer Verlag, 2007)Fifty-five ampicillin-resistant (Ampr) Escherichia coli strains were isolated from 51 drinking water points in Rize region containing abundant fresh water sources in Turkey during the years 2000 to 2002 and from January ... -
Klinik örneklerden izole edilen karbapenem dirençli pseudomonas aeruginosa izolatlarındaki antibiyotik direncinin moleküler analizi
Pseudomonas aeruginosa riskli hasta gruplarında morbidite ve mortalitede artışa neden olan fırsatçı patojendir. Karbapenem direncinin tehdit haline geldiği günümüzde, direnç genleri mobil genetik elemanlar aracılığıyla ... -
Molecular characterization of antibiotic resistant Escherichia coli strains isolated from tap and spring waters in a coastal region in Turkey
A hundred and seventeen antibiotic-resistant Escherichia coli strains were isolated from public tap and spring waters which were polluted by fecal coliforms. There were no significant differences between two water sources ... -
Molecular epidemiological analysis of integron gene cassettes and tetA/tetB/tetD gene associations in Escherichia coli strains producing extended-spectrum beta-lactamase (ESBL) in urine cultures
Çiçek, Ayşegül Çopur; Şemen, Vicdan; Ejder, Nebahat Aydoğan; Gündoğdu, Deniz Zehra Ulusan; Kalcan, Sema Koçyiğit; Köse, Fatma Tufan; Özgümüş, Osman Birol (Wroclaw Medical University, 2021)Background. Epidemiological studies of tetracycline (TE) resistance genes and integron gene cassettes, particularly in urine samples, are limited in Turkey. Objectives. To investigate antibiotic susceptibility profiles, ... -
Molecular epidemiology of clinical Pseudomonas aeruginosa isolates carrying IMP-1 metallo-β-lactamase gene in a university hospital in Turkey
Özgümüş, Osman Birol; Caylan, Rahmet; Tosun, İlknur; Sandallı, Cemal; Aydın, Kemalettin; Köksal, İftihar (2007)Pseudomonas aeruginosa isolates carrying IMP- or VIM-type metallo-?-lactamase (MBL) have been increasingly reported in hospitals worldwide. One hundred P. aeruginosa clinical isolates from unrelated inpatients hospitalized ... -
Molecular epidemiology, antimicrobial resistance and characterization of extended-spectrum beta-lactamases of salmonella enterica serotype paratyphi B clinical Isolates
Bayramogğu, Gülçin; Özgümüş, Osman Birol; Kolaylı, Fetiye; Kamburoğlu, Ahu; Beşli, Yeşim; Dinç, Uğur; Tosun, İlknur; Aydın, Faruk (Ankara Microbiology Soc, 2014)Although Salmonella enterica serotype Paratyphi B is the less frequently isolated serotype worldwide and in Turkey, it is the most common serotype in our hospital, with a marked increase in 2007. the purpose of this study ... -
Prevalence of integrons and a new dfrA17 variant in Gram-negative bacilli which cause community-acquired infections
Sandallı, Cemal; Buruk, Celal Kurtuluş; Sancaktar, Metin; Özgümüş, Osman Birol (Wiley, 2010)A hundred and eleven Gram-negative bacilli from community-acquired infections were characterized by antimicrobial susceptibility testing, screened for class 1 and 2 integrons, and statistically evaluated for the association ... -
A single clone acinetobacter baumannii outbreak in a state hospital in Turkey
Çiçek, Aysegül Çopur; Karagöz, Alper; Köksal, Ersin; Ertürk, Ayşe; Özgümüş, Osman Birol; Köksal, Zeynep Şentürk; Durmaz, Rıza (Natl Inst Infectious Diseases, 2013)Acinetobacter baumannii is an important pathogen in hospitalized patients, particularly those in the intensive care unit (ICU). A total of 21 A. baumannii (6 from 5 patients and 15 from environmental samples) were isolated ... -
Synthesis of some N-alkoxycarbonyl-N"-benzoyl-benzamidrazones(p- toluamidrazones) and 1,3,5-trisubstituted 1,2,4-triazole derivatives from N-benzoylimidates and their antimicrobial and anticancer screening studies
Bekircan, Olcay; Kahveci, Bahittin; Özgümüş, Osman Birol (Wiley, 2007)Some new N-alkoxycarbonyl-N?-benzoyl-benzamidrazones (p-toluamidrazones) 3a-3d, and 1,3,5-trisubstituted 1,2,4-triazole 4a-4h derivatives by starting from N-benzoylbenzimidates or N-benzoyl-p-toluimidates. The structures ...