Yazar "Özgümüş, Osman Birol" için PubMed İndeksli Yayınlar Koleksiyonu listeleme
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Antimicrobial resistance patterns and integron carriage of escherichia coli isolates causing community-acquired infections in Turkey
Çiçek, Ayşegül Çopur; Özgümüş, Osman Birol; Saral, Ayşegül; Sandallı, Cemal (Korean Soc Laboratory Medicine, 2014)We aimed to observe antimiCrobial resistance patterns and integron carriage of Escherichia coli isolates causing community-acquired infections. Two hundred sixty-eight E. coli strains were obtained from outpatients with ... -
Antimicrobial susceptibility and molecular characterization of multidrug-resistant acinetobacter baumannii isolated in an university hospital
Direkel, Şahin; Çiçek, Ayşegül Çopur; Karagöz, Alper; Aydoğan Ejder, Nebahat; Oktay, Efdal; Delialioğlu, Nuran; Özgümüş, Osman Birol; Durmaz, Rıza (Ankara Microbiology Soc, 2016)Acinetobacter baumannii, an aerobic, non-motile, gram-negative bacterium is an important nosocomial pathogen which shows resistance to the most antibiotics. Carbapenems are the most commonly used antibiotics for the treatment ... -
Carriage of class 1 and 2 integrons in acinetobacter baumannii and pseudomonas aeruginosa isolated from clinical specimens and a novel gene cassette array: bla(OXA-11)-cmlA7
Mengeloğlu, Fırat Zafer; Çiçek, Ayşegül Çopur; Koçoğlu, Esra; Sandallı, Cemal; Budak, Emine Esra; Özgümüş, Osman Birol (Ankara Microbiology Soc, 2014)The dissemination of antibiotic resistance genes between bacteria leads to serious problems in the treatment of infectious diseases. It has been shown that resistance genes can also be carried by the integrons. There are ... -
Characterization of class 1 and class 2 integron gene cassettes in escherichia coil strains isolated from urine cultures: A multicenter study
Çopur Çiçek, Ayşegül; Sandallı, Cemal; Budak, Emine Esra; Yağmur, Gülhan; Çizmeci, Zeynep; Ak, Sibel; Balcı, Pervin Özlem; Say Coşkun, Safiye Umut; Ay Altıntop, Yasemin; Fırat, Mehmet; Sarı, Fatma; Çalışkan, Ahmet; Yıldız, Nazan; Sancaktar, Metin; Özgümüş, Osman Birol (Ankara Microbiology Soc, 2016)Escherichia coli is the most common pathogen isolated from both nosocomial and community acquired urinary tract infections. Although there are many studies from different centers concerning the antibiotic susceptibility ... -
Comparison of a novel antigen detection test with reverse transcription polymerase chain reaction assay for laboratory diagnosis of SARS-CoV-2 infection
Cirit, Osman Sezen; Mutlu, Esvet; Sancak, Banu; Kocagöz, Tanıl; Can, Özge; Çiçek, Candan; Sayıner, Ayça Arzu; Appak, Özgür; Uyar, Neval Yurttutan; Külah, Canan; Çiçek, Ayşegül Çopur; Özgümüş, Osman Birol; Altıntop, Yasemin Ay; Saatçi, Esma; Karslıgil, Tekin; Zer, Yasemin; Özen, Nevgün Sepin; Çekin, Yeşim; Karahan, Zeynep Ceren; Evren, Ebru; Karakoç, Ayşe Esra; Orhan, Sultan Gülbahçe; Mutlu, Derya; Bozdemir, Tuğba; Çaycı, Yeliz Tanrıverdi; Çınar, Canberk; Taşbakan, Meltem; Mert, Merve; Çınar, Ece; Kutlusoy, Oya Özlem Eren; Kocagöz, Sesin; Ertürk, Ayşe; Çelik, İlhami; Mete, Ayşe Özlem; Eneyli, Müge Günalp; Akdemir, İrem; Karakök, Taliha; İnan, Dilara; Atilla, Aynur; Taflan, Şevket Onur; Yörük, Kağan Etka (Springer, 2022)Molecular diagnosis of severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) by real-time reverse transcription polymerase chain reaction (RT-PCR) in respiratory specimens is considered the gold standard method. ... -
Determination and molecular analysis of antibiotic resistance in Gram-negative enteric bacteria isolated from Pelophylax sp. in the Eastern Black Sea Region (vol 69, pg 223, 2021)
Rakıcı, Erva; Altunışık, Abdullah; Şahin, Kazım; Özgümüş, Osman Birol (Akademia Kiado Zrt., 2021)The sentence 'However, two of three quinolone-resistant Klebsiella strains showed the novel amino acid substitution in the gyrA gene resulting in Ser83Asp and Asp87Glu.' should be corrected to 'However, one of three ... -
Distribution of beta-lactamase genes among carbapenem-resistant klebsiella pneumoniae strains isolated from patients in Turkey
Iraz, Meryem; Düzgün, Azer Özad; Sandallı, Cemal; Doymaz, Mehmet Ziya; Akkoyunlu, Yasemin; Saral, Ayşegül; Peleg, Anton Y.; Özgümüş, Osman Birol; Beriş, Fatih Şaban; Karaoğlu, Hakan; Çiçek, Ayşegül Çopur (Korean Soc Laboratory Medicine, 2015)Background: the emergence of carbapenem-resistant Klebsiella pneumoniae poses a serious problem to antibiotic management. We investigated the beta-lactamases in a group of carbapenem-resistant K. pneumoniae clinical isolates ... -
Evaluation of 2015-2016 MOTAKK HBV DNA and HCV RNA external quality assessment national program results
Karataylı, Ersin; Soydemir, Ege; Aksoy, Zeynep Büşra; Kızılpınar, Mehtap; Altay Koçak, Aylin; Karataylı, Senem Ceren; Yurdcu, Esra; Yıldırım, Umut; Güriz, Haluk; Bozdayı, Gülendam; Yurdaydın, Cihan; İlhan, Osman; Yıldırım, Yasin; Bozdayı, A. Mithat; Oğuz, Açelya Yalçıntaş; Barış, Ahmet; Alp, Alpaslan; Aksözek, Alper; Sayıner, Arzu; Karagül, Aydan; Ordu, Aylin; İstanbullu, Aye; Otlu, Barış; Arıdoğan, Buket; Aksu, Burak; Buruk, C. Kurtuluş; Karahan, Ceren; Güney, Çakır; Toksöz, Devrim; Yıldırım, Dilara; Çolak, Dilek; Dağlar, Duygu Eren; Fındık, Duygu; Kaş, Elif; Çalışkan, Emel; Zeyrek, Fadile Yıldız; Arslan, Fatma; Demir, Feyza; Milletli, Fikriye; Kibar, Filiz; Özdinçer, Furkan; Dündar, Gülnur; Arslan, Hande; Ağça, Harun; Alışkan, Hikmet Eda; Güdücüoğlu, Hüseyin; Fidan, Işıl; Akyar, Işın; Afşar, İlhan; Kaleli, İlknur; Dönmez, İsmail; Yanık, Kemalettin; Midilli, Kenan; Çubukçu, Kıvanç; Özdemir, Mehmet; Acar, Melek; Yalınay, Meltem; Kuşkucu, Mert Ahmet; Bakıcı, Mustafa Zahir; Aydın, Neriman; Yılmaz, Neziha; Çeken, Nihan; Ziyade, Nihan; Yılmaz, Nisel; Özgümüş, Osman Birol; Gitmişoğlu, Özlem; Demirgan, Recep; Kesli, Recep; Güçkan, Rıdvan; Sertöz, Ruchan; Akgün, Sadık; Aksaray, Sebahat; Tezcan, Seda; Kaygusuz, Sedat; Gökahmetoğlu, Selma; Meşe, Sevim; Bayık, Seyit Ahmet; Akcalı, Sinem; Gürcan, Şaban; Karslıgil, Tekin; Us, Tercan; Özekinci, Tuncer; Pilgir, Tülin; Aslan, Uğur; Dinç, Uğur; Coşkun, Umut Safiye Say; Çetinkol, Yeliz; Keskin, Yusuf; Ayaydın, Zeynep; Toraman, Zülal Aşçı (Ankara Microbiology Soc, 2018)MOTAKK, as a national external quality control program has been launched to evaluate the molecular detection of viral infections including HBV DNA and HCV RNA in molecular microbiology diagnostic laboratories in Turkey. ... -
Klinik örneklerden izole edilen karbapenem dirençli pseudomonas aeruginosa izolatlarındaki antibiyotik direncinin moleküler analizi
Pseudomonas aeruginosa riskli hasta gruplarında morbidite ve mortalitede artışa neden olan fırsatçı patojendir. Karbapenem direncinin tehdit haline geldiği günümüzde, direnç genleri mobil genetik elemanlar aracılığıyla ... -
Molecular characterization of antibiotic resistant Escherichia coli strains isolated from tap and spring waters in a coastal region in Turkey
A hundred and seventeen antibiotic-resistant Escherichia coli strains were isolated from public tap and spring waters which were polluted by fecal coliforms. There were no significant differences between two water sources ... -
Molecular epidemiological analysis of integron gene cassettes and tetA/tetB/tetD gene associations in Escherichia coli strains producing extended-spectrum beta-lactamase (ESBL) in urine cultures
Çiçek, Ayşegül Çopur; Şemen, Vicdan; Ejder, Nebahat Aydoğan; Gündoğdu, Deniz Zehra Ulusan; Kalcan, Sema Koçyiğit; Köse, Fatma Tufan; Özgümüş, Osman Birol (Wroclaw Medical University, 2021)Background. Epidemiological studies of tetracycline (TE) resistance genes and integron gene cassettes, particularly in urine samples, are limited in Turkey. Objectives. To investigate antibiotic susceptibility profiles, ... -
Molecular epidemiology of clinical Pseudomonas aeruginosa isolates carrying IMP-1 metallo-β-lactamase gene in a university hospital in Turkey
Özgümüş, Osman Birol; Caylan, Rahmet; Tosun, İlknur; Sandallı, Cemal; Aydın, Kemalettin; Köksal, İftihar (2007)Pseudomonas aeruginosa isolates carrying IMP- or VIM-type metallo-?-lactamase (MBL) have been increasingly reported in hospitals worldwide. One hundred P. aeruginosa clinical isolates from unrelated inpatients hospitalized ... -
Molecular epidemiology, antimicrobial resistance and characterization of extended-spectrum beta-lactamases of salmonella enterica serotype paratyphi B clinical Isolates
Bayramogğu, Gülçin; Özgümüş, Osman Birol; Kolaylı, Fetiye; Kamburoğlu, Ahu; Beşli, Yeşim; Dinç, Uğur; Tosun, İlknur; Aydın, Faruk (Ankara Microbiology Soc, 2014)Although Salmonella enterica serotype Paratyphi B is the less frequently isolated serotype worldwide and in Turkey, it is the most common serotype in our hospital, with a marked increase in 2007. the purpose of this study ... -
Prevalence of integrons and a new dfrA17 variant in Gram-negative bacilli which cause community-acquired infections
Sandallı, Cemal; Buruk, Celal Kurtuluş; Sancaktar, Metin; Özgümüş, Osman Birol (Wiley, 2010)A hundred and eleven Gram-negative bacilli from community-acquired infections were characterized by antimicrobial susceptibility testing, screened for class 1 and 2 integrons, and statistically evaluated for the association ... -
A single clone acinetobacter baumannii outbreak in a state hospital in Turkey
Çiçek, Aysegül Çopur; Karagöz, Alper; Köksal, Ersin; Ertürk, Ayşe; Özgümüş, Osman Birol; Köksal, Zeynep Şentürk; Durmaz, Rıza (Natl Inst Infectious Diseases, 2013)Acinetobacter baumannii is an important pathogen in hospitalized patients, particularly those in the intensive care unit (ICU). A total of 21 A. baumannii (6 from 5 patients and 15 from environmental samples) were isolated ...