Browsing by Author "Sandallı, Cemal"
Now showing items 1-20 of 49
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Anthocyanins profiling of Thymus praecox opiz subsp caucasicus var. caucasicus
Turumtay, Emine Akyüz; Turumtay, Halbay; Demir, Adem; Selvi, Emine Kılıçkaya; Yazıcı, Emre; Sandallı, Cemal; Yazıcı, Zihni Açar (Elsevier Science Bv, 2015)Thymus praecox Opiz subsp. caucasicus var. caucasicus (Anzer tea) was studied to determine its anthocyanin content; anthocyanin stability in response to acidic hydrolysis and temperature changes. in this study, anthocyanin ... -
Antibiotic resistance profiles of enteric bacteria Isolated from Kucukcekmece Lagoon (Istanbul – Turkey)
Bu çalışmanın amacı, Küçükçekmece Lagünü’ndeki (İstanbul) fekal bakteri yoğunluğunu bulmak ve izole edilen Gram negatif basillerin antibiyotiklere direncini analiz etmektir. Örnekler, Haziran 2006'dan Haziran 2008 tarihleri ... -
Antibiotic resistance profiles of enteric cacteria isolated from Kucukcekmece Lagoon (Istanbul-Turkey)
Sivri, Nuket; Sandallı, Cemal; Özgümüş, Osman Birol; Çolakoğlu, Feyza; Doğan, Dilek (Central Fisheries Research Inst, 2012)The aim of this study is to find out the density of the fecal bacteria and to analyze resistance to antimicrobials of Gram negative bacilli isolated from the Kucukcekmece Lagoon, Istanbul. Samples were taken monthly from ... -
Antimicrobial resistance patterns and integron carriage of escherichia coli isolates causing community-acquired infections in Turkey
Çiçek, Ayşegül Çopur; Özgümüş, Osman Birol; Saral, Ayşegül; Sandallı, Cemal (Korean Soc Laboratory Medicine, 2014)We aimed to observe antimiCrobial resistance patterns and integron carriage of Escherichia coli isolates causing community-acquired infections. Two hundred sixty-eight E. coli strains were obtained from outpatients with ... -
Beta-lactamase genes in carbapenem resistance Acinetobacter baumannii isolates from a Turkish university hospital
Coşkun, Umut Safiye Say; Çalışkan, Emel; Çiçek, Ayşegül Çopur; Turumtay, Halbay; Sandallı, Cemal (J Infection Developing Countries, 2019)Introduction: the spread of Acinetobacter baumannii, resistant to most of the available antimicrobial agents, is a serious health problem. the high rate of carbapenem resistance among Acinetobacter baumannii isolates is ... -
Carriage of class 1 and 2 integrons in acinetobacter baumannii and pseudomonas aeruginosa isolated from clinical specimens and a novel gene cassette array: bla(OXA-11)-cmlA7
Mengeloğlu, Fırat Zafer; Çiçek, Ayşegül Çopur; Koçoğlu, Esra; Sandallı, Cemal; Budak, Emine Esra; Özgümüş, Osman Birol (Ankara Microbiology Soc, 2014)The dissemination of antibiotic resistance genes between bacteria leads to serious problems in the treatment of infectious diseases. It has been shown that resistance genes can also be carried by the integrons. There are ... -
Characteristics in the whole-genome sequence of Klebsiella pneumoniae ST147 from Turkey
Turumtay, Halbay; Allam, Mushal; Sandallı, Aytül; Turumtay, Emine Akyüz; Genç, Hacer; Sandallı, Cemal (Akademia Kiado Zrt., 2022)The study aimed to analyze antibiotic resistance determinants in a carbapenem-resistant Klebsiella pneumoniae by whole-genome sequencing (WGS). K. pneumoniae was isolated from a urine sample and it was characterized by 16S ... -
Characterization of class 1 and class 2 integron gene cassettes in escherichia coil strains isolated from urine cultures: A multicenter study
Çopur Çiçek, Ayşegül; Sandallı, Cemal; Budak, Emine Esra; Yağmur, Gülhan; Çizmeci, Zeynep; Ak, Sibel; Balcı, Pervin Özlem; Say Coşkun, Safiye Umut; Ay Altıntop, Yasemin; Fırat, Mehmet; Sarı, Fatma; Çalışkan, Ahmet; Yıldız, Nazan; Sancaktar, Metin; Özgümüş, Osman Birol (Ankara Microbiology Soc, 2016)Escherichia coli is the most common pathogen isolated from both nosocomial and community acquired urinary tract infections. Although there are many studies from different centers concerning the antibiotic susceptibility ... -
Characterization of tetracycline resistance genes in tetracycline-resistant Enterobacteriaceae obtained from a coliform collection
Sandallı, Cemal; Özgümüş, Osman Birol; Sevim, Ali (Springer, 2010)Tetracycline resistance has been used as the key determinant to monitor resistance genes in natural environments such as rivers, lakes or seawater. The aim of this study was evaluate the frequency of tetA, tetB, tetC, tetD ... -
Characterızatıon of catalytıc carboxylate trıad ın non-replıcatıve dna polymerase III (pol E) of Geobacillus kaustophilus HTA
Sandallı, Cemal; Singh, Kamalendra; Modak, Mukund J. (C M B Assoc, 2012)Three aspartic acid residues D378, D380 and D531 form the catalytic carboxylate triad in Geobacillus kaustophilus (Gka) DNA polymerase III alpha-subunit homolog, pol E. We cloned, expressed and purified wild type (WT), ... -
Chilo iridescent virus (CIV) ORF 012L encodes a protein with both exonuclease and endonuclease functions
Dizman, Yeşim Aktürk; Muratoğlu, Hacer; Sandallı, Cemal; Nalcacioğlu, Remziye; Demirbağ, Zihni (Springer Wien, 2016)Chilo iridescent virus (CIV) is the type member of the genus Iridovirus within the family Iridoviridae. the virions of CIV contain a single linear dsDNA molecule that is circularly permuted and terminally redundant. the ... -
Class 1 and class 2 integrons and plasmid-mediated antibiotic resistance in coliforms isolated from ten rivers in northern Turkey
We aimed to determine the molecular mechanisms of antibiotic resistance in coliforms isolated from ten rivers in northern region of Turkey. A total of 183 isolates were tested for antimicrobial susceptibility by disk ... -
Cloning, expression, and characterization of a novel CTP synthase gene from Anoxybacillus gonensis G2
Sandallı, Cemal; Saral, Ayşegül; Ülker, Serdar; Karaoğlu, Hakan; Beldüz, Ali Osman; Çiçek, Ayşegül Çopur (2014)The cytidine-5'-triphosphate (CTP) synthase (EC 6.4.3.2) gene (pyrG) was cloned and sequenced from the thermophilic bacterium Anoxybacillus gonensis G2 (Ago). The gene is 1590 bp in length and encodes a protein of 530 amino ... -
Cloning, expression, purification and characterisation of a thermostable chitinase from Bacillus licheniformis A1
Sandallı, Cemal; Kaçağan, Murat; Çanakcı, Sabriye; Belduz, Ali Osman (University of Milan, 2008)The chitinase B gene (ch/B65) of Bacillus licheniformis A1 (BlicA1) isolated from Diyadin hotspring in Turkey was cloned and sequenced. The gene is 1779 bp long and encodes a protein 592 amino acids with a 35-amino acid ... -
Cloning, expression, purification and characterization of fructose-1,6-bisphosphate aldolase from Anoxybacillus gonensis G2
Ertunga, Nagihan Sağlam; Çolak, Ahmet; Belduz, Ali Osman; Çanakcı, Sabriye; Karaoğlu, Hakan; Sandallı, Cemal (2007)The fructose-1,6-bisphosphate aldolase gene from the thermophilic bacterium, Anoxybacillus gonensis G2, was cloned and sequenced. Nucleotide sequence analysis revealed an open reading frame coding for a 30.9 kDa protein ... -
Cloning, purification and characterization of acetyl Xylane esterase from anoxybacillus flavithermus DSM 2641(T) with activity on low molecular-weight acetates
Eminoğlu, Ayşenur; Ülker, Serdar; Sandallı, Cemal (Springer, 2015)Family 4 carbohydrate esterases (CE-4) have deacetylate different forms of acetylated poly/oligosaccharides in nature. This family is recognized with a specific polysaccharide deacetylase domain assigned as NodB homology ... -
Comparison of DIG-11-dUTP utilization by Geobacillus caldoxylosilyticus TK4, Mycobacterium tuberculosis and Escherichia coli DNA polymerases
Sandallı, Cemal; Çanakcı, Sabriye; Demir, İsmail; Modak, Mukund J.; Belduz, Ali Osman (Springer Link, 2010)DNA polymerases are used for many applications and we comparatively investigated DNA synthesis activity of DNA polymerase I enzymes of Geobacilluscaldoxylosilyticus TK4, Escherichia coli and Mycobacterium tuberculosis with ... -
Comparison of verona integron-borne metallo-beta-lactamase (VIM) variants reveals differences in stability and inhibition profiles
Makena, Anne; Düzgün, Azer Özad; Brem, Jurgen; McDonough, Michael A.; Rydzik, Anna M.; Abboud, Martine I.; Saral, Ayşegül; Çiçek, Ayşegül Çopur; Sandallı, Cemal; Schofield, Christopher J. (Amer Soc Microbiology, 2016)Metallo-beta-lactamases (MBLs) are of increasing clinical significance; the development of clinically useful MBL inhibitors is challenged by the rapid evolution of variant MBLs. the Verona integron-borne metallo-beta-lactamase ... -
Detection of class 1 integron in Acinetobacter baumannii isolates collected from nine hospitals in Turkey
Çiçek, Ayşegül Çopur; Düzgün, Azer Özad; Saral, Ayşegül; Kayman, Tuba; ÇIzmecI, Zeynep; Balci, Pervin Özlem; Dal, Tuba; Fırat, Mehmet; Tosun, İsmail; Altıntop, Yasemin Ay; Çalışkan, Ahmet; Yazıcı, Yelda; Sandallı, Cemal (Elsevier, 2013)Objective: To investigate the antibiotic resistance genes inserted into class 1 and class 2 integrons in Acinetobacter baumannii (A. baumannii) isolates obtained from nine different cities in Turkey. Methods: A collection ... -
Determination of a novel integron-located variant (bla(OXA-320)) of class D beta-lactamase in Proteus mirabilis
Çiçek, Ayşegül Çopur; Düzgün, Azer Özad; Saral, Ayşegül; Sandallı, Cemal (Wiley, 2014)Proteus mirabilis (P. mirabilis) is one of Gram-negative pathogens encountered in clinical specimens. A clinical isolate (TRP41) of P. mirabilis was isolated from a Turkish patient in Turkey. the isolate was identified ...
